Announcements

Recent Publications From Our Trainees


2013

Basham, K.J., Kieffer, C., Shelton, D.N., Leonard, C.J., Bhonde, V.R., Vankayalapati, H., Milash, B., Bearss, D.J., Looper, R.E., and Welm, B.E. Chemical genetic screen reveals a role for desmosomal adhesion in mammary branching morphogenesis. J Biol Chem. 2013 Jan 25; 288 (4): 2261-70. PMCID: PMC3554898.
Xu Wang, Daniel Kopinke, Junji Lin, Adam D. McPherson, Robert N. Duncan, Hideo Otsuna, Enrico Moro, Kazuyuki Hoshijima, David J. Grunwald, Francesco Argenton, Chi-Bin Chien, L. Charles Murtaugh, Richard I. Dorsky (2012). Wnt Signaling Regulates Postembryonic Hypothalamic Progenitor Differentiation. Developmental Cell 23, 624-636. PMC 3445042
Schell JC & Rutter J. (2013). The long and winding road to the mitochondrial pyruvate carrier. Cancer and Metabolism. 1:6 doi:10.1186/2049-3002-1-6
M. D. Shapiro, Z. Kronenberg, C. Li, E.T. Domyan, H. Pan, M. Campbell, H. Tan, C.D. Huff, H. Hu, A.I. Vickrey, S.A. Nielsen, S.A. Stringham, E. Willerslev, M. T. P. Gilbert, M. Yandell, G. Zhang, J. Wang (2013). Genomic diversity and evolution of the head crest in the rock pigeon. Science 339: 1063-1067. PMID: 23371554
M.D. Shapiro, E.T. Domyan (2013) Quick guide: Domestic pigeons. Current Biology (in press).
 

2012

Bricker DK, Taylor EB, Schell JC, Orsak T, Boutron A, Chen YC, Cox JE, Cardon CM, Van Vranken JG, Dephoure N, Redin C, Boudina S, Gygi SP, Brivet M, Thummel CS, Rutter J. (2012). A mitochondrial pyruvate carrier required for pyruvate uptake in yeast, Drosophila, and humans. Science. 337(6090):96-100. doi: 10.1126/science.1218099. Epub 2012 May 24. PMID: 22628558
KA Frizzell, SG Rynearson, MM Metzstein (2012) Drosophila mutants show NMD pathway activity is reduced, but not eliminated, in the absence of Smg6. RNA 18(8):1475-86. PMID: 22740637
 

2011

Wythe JD, Jurynec MJ, Urness LD, Jones CA, Milan DJ, Grunwald DJ, MacRae CA, Li DY Hadp1, a novel pleckstrin homology domain family member, is required for cardiac function in zebrafish. Disease Models and Mechanisms 2011 Accepted/In press.
Warf MB, Johnson WE, Bass BL. Improved annotation of C. elegans microRNAs by deep sequencing reveals structures associated with processing by Drosha and Dicer. RNA. 2011 Apr;17(4):563-77. PMID:21307183
Drews GN, Wang D, Steffen JG, Schumaker KS, Yadegari R. Identification of genes expressed in the angiosperm female gametophyte. J Exp Bot. 2011 Mar;62(5):1593-9. PMID: 21118822
Aman A, Nguyen M, Piotrowski T. Wnt/β-catenin dependent cell proliferation underlies segmented lateral line morphogenesis. Dev Biol. 2011 Jan 15;349(2):470-82. PMID: 20974120
Zukor KA, Kent DT, Odelberg SJ. Meningeal cells and glia establish a permissive environment for axon regeneration after spinal cord injury in newts. Neural Dev. 2011 Jan 4;6(1):1. PMID: 21205291
 

2010

Rathore SS, Bend EG, Yu H, Hammarlund M, Jorgensen EM, Shen J. Syntaxin Nterminal peptide motif is an initiation factor for the assembly of the SNARESec1/ Munc18 membrane fusion complex. Proc Natl Acad Sci U S A. 2010 Dec
28;107(52):22399-406. PMID:21139055
Mackay DR, Makise M, Ullman KS. Defects in nuclear pore assembly lead to activation of an Aurora B-mediated abscission checkpoint. J Cell Biol. 2010 Nov 29;191(5):923-31. PMID:21098116
Zukor KA, Kent DT, Odelberg SJ. Fluorescent whole-mount method for visualizing three-dimensional relationships in intact and regenerating adult newt spinal cords. Dev Dyn. 2010 Nov;239(11):3048-57. PMID: 20931649
Wyatt C, Ebert A, Reimer MM, Rasband K, Hardy M, Chien CB, Becker T, Becker CG. Analysis of the astray/robo2 zebrafish mutant reveals that degenerating tracts do not provide strong guidance cues for regenerating optic axons. J Neurosci. 2010 Oct 13;30(41):13838-49. PMID: 20943924
Chen JL, Merl D, Peterson CW, Wu J, Liu PY, Yin H, Muoio DM, Ayer DE, West M, Chi JT. Lactic acidosis triggers starvation response with paradoxical induction of TXNIP through MondoA. PLoS Genet. 2010 Sep 2;6(9). pii: e1001093. PMID: 20844768
Pittman AJ, Gaynes JA, Chien CB. nev (cyfip2) is required for retinal lamination and axon guidance in the zebrafish retinotectal system. Dev Biol. 2010 Aug 15;344(2):784-94. PMID: 20537992
Mackay DR, Ullman KS, Rodesch CK. Time-lapse imaging of mitosis after siRNA transfection. J Vis Exp. 2010 Jun 6;(40). pii: 1878. doi: 10.3791/1878. PMID:20548280
Peterson CW, Stoltzman CA, Sighinolfi MP, Han KS, Ayer DE. Glucose controls nuclear accumulation, promoter binding, and transcriptional activity of the MondoA-Mlx heterodimer. Mol Cell Biol. 2010 Jun;30(12):2887-95. PMID: 20385767
Aman A, Piotrowski T. Cell migration during morphogenesis. Dev Biol. 2010 May 1;341(1):20-33. PMID: 19914236
Zhong M, Niu W, Lu ZJ, Sarov M, Murray JI, Janette J, Raha D, Sheaffer KL, Lam HY, Preston E, Slightham C, Hillier LW, Brock T, Agarwal A, Auerbach R, Hyman AA, Gerstein M, Mango SE, Kim SK, Waterston RH, Reinke V, Snyder M. Genome-wide identification of binding sites defines distinct functions for Caenorhabditis elegans PHA-4/FOXA in development and environmental response. PLoS Genet. 2010 Feb 19;6(2):e1000848. PMID:20174564
Zhong M, Niu W, Lu ZJ, Sarov M, Murray JI, Janette J, Raha D, Sheaffer KL, Lam HY, Preston E, Slightham C, Hillier LW, Brock T, Agarwal A, Auerbach R, Hyman AA, Gerstein M, Mango SE, Kim SK, Waterston RH, Reinke V, Snyder M. Genome-wide identification of binding sites defines distinct functions for Caenorhabditis elegans PHA-4/FOXA in development and environmental response. PLoS Genet. 2010 Feb 19;6(2):e1000848. PMID:20174564
 

2009

Aman A, Piotrowski T. Multiple signaling interactions coordinate collective cell migration on the posterior lateral line primordium. Cell Adh Migr. 2009 Oct-Dec;3(4):365-8. PMID:19736513
Vázquez-Chona FR, Clark AM, Levine EM. Rlbp1 promoter drives robust Müller glial GFP expression in transgenic mice. Invest Ophthalmol Vis Sci. 2009 Aug;50(8):3996-4003. PMID:19324864
De La O JP, Murtaugh LC. Notch and Kras in pancreatic cancer: at the crossroads of mutation, differentiation and signaling. Cell Cycle. 2009 Jun 15;8(12):1860-4. PMID: 19440048
De La O JP, Murtaugh LC. Notch signaling: where pancreatic cancer and differentiation meet? Gastroenterology. 2009 May;136(5):1499-502. PMID:19327730
Mukhtasimova NPZ*, Lee WY*, Wang HL, Sine SM. Detection and trapping of intermediate
states priming nicotinic receptor channel opening. Nature. 2009 May 21;459(7245):451-
4.PMID:19339970 (*contributed equally)
Hammarlund M, Nix P, Hauth L, Jorgensen EM, Bastiani M. Axon regeneration requires a conserved MAP kinase pathway. Science. 2009 Feb 6;323(5915):802-6. Epub 2009 Jan 22. PMID:19164707
Jurrus E, Hardy M, Tasdizen T, Fletcher PT, Koshevoy P, Chien CB, et al. Axon tracking in serial block-face scanning electron microscopy. Med Image Anal. 2009;13(1):180-8. PMCID: 2597704
Sieber MH, Thummel CS. The DHR96 nuclear receptor controls triacylglycerol homeostasis in Drosophila. Cell Metab. 2009;10(6):481-90. PMCID: 2803078
 

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